Washington State Ferries: Seattle, Bremerton, Bainbridge Island and 16 other ports. San Francisco Bay Ferry: San Francisco Ferry Building, Vallejo, Richmond (California) and seven other ports. Golden Gate Ferry: Larkspur, San Francisco Ferry Building, Sausalito, Tiburon, Angel Island and Oracle Park. Kitsap Transit: Seattle, Bremerton, Port Orchard, Kingston (Washington), Southworth and Annapolis (Port Orchard). Alaska Marine Highway: from Skagway, Haines and Kodiak. Catalina Express: Avalon, Long Beach, San Pedro (Los Angeles), Dana Point and Two Harbors. King County Water Taxi: Seattle, West Seattle and Vashon Island. Alcatraz City Cruises: San Francisco Pier 33, Alcatraz and Angel Island. And seven other companies.